Before things got altered again John went to that bar in 1999 and confronted Jack with what he knew. Up until then no one knew that Jack was the guilty party from the past until John tells his dad what to do. ALso Jack does not know John when he comes to him in the bar but he now knows due to the change in the timeline after that meeting and when they finally got the proof in the past the present Jack goes after John to kill him. I can only assume since this timeline change and all parties have these memories that Jack did stay in hiding this time but how does he know who adult John is to come after him. Could it be that John also confronted him as he did before on the timeline. You would think that would not be possible if he was in hiding this time. They all thought he was dead (drowned maybe) until this point and were not looking for him so it was easy for him to hide. Only John knew he was alive and was the killer.
All I can figure out is the reason for waiting 30 yrs is up to this point no one knew he was alive. He would have no reason to think that John knew he was alive or that he even knew who John was. They made you believe he attacked John because John had discovered the truth about him but they didnt make it very clear on the new timeline how he knew that John knew that he was the killer. They make you think oh in the previous scene at he bar he told him but that was on a different timeline before he had proof that he was the killer. I think I am rambling.
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